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  5. Len_g16206

Len_g16206


Description : mannan synthesis accessory protein *(MSR) & original description: none


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16206
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G51630 No alias O-fucosyltransferase family protein 0.05 OrthoFinder output from all 47 species
AT3G21190 No alias O-fucosyltransferase family protein 0.08 OrthoFinder output from all 47 species
Adi_g014962 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g056219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01824 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Ala_g36936 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Als_g23140 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Als_g30862 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Als_g35656 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0020.g015587 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Dac_g15452 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g06387 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g35690 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Dde_g00695 No alias mannan synthesis accessory protein *(MSR) & original... 0.01 OrthoFinder output from all 47 species
Dde_g21485 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g08327 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20020 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01016156001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.02 OrthoFinder output from all 47 species
Gb_29818 No alias mannan synthesis accessory protein 0.05 OrthoFinder output from all 47 species
Lfl_g06050 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
MA_24566g0010 No alias mannan synthesis accessory protein 0.04 OrthoFinder output from all 47 species
MA_76208g0010 No alias mannan synthesis accessory protein 0.03 OrthoFinder output from all 47 species
Msp_g44602 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g02963 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g43787 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Pir_g10269 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Pir_g57055 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g10103 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g18442 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Ppi_g33079 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g18256 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Spa_g18257 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
Spa_g31357 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10286 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 117 384
No external refs found!