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  5. Len_g16197

Len_g16197


Description : CWF19-type post-transcriptionally regulatory factor & original description: none


Gene families : OG0005285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16197

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0052.g031528 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 319 340
IPR006767 Cwf19-like_C_dom-2 531 613
IPR006768 Cwf19-like_C_dom-1 395 509
No external refs found!