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  5. Len_g15790

Len_g15790


Description : not classified & original description: none


Gene families : OG0003839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15790
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Aev_g01185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G085400.1 Ceric.03G085400 not classified & original description: pacid=50571603... 0.05 OrthoFinder output from all 47 species
Dac_g03709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015902001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os03g03470.1 LOC_Os03g03470 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g07958 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g19713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo417692 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo417702 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo419135 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!