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  5. Len_g15765

Len_g15765


Description : E3 ubiquitin ligase *(RIE1) & original description: none


Gene families : OG0001080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15765

Target Alias Description ECC score Gene Family Method Actions
AT3G61180 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g51025 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22425 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0711.g083022 No alias E3 ubiquitin ligase *(RIE1) & original description: CDS=402-1655 0.04 OrthoFinder output from all 47 species
Mp2g06960.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Pir_g31213 No alias E3 ubiquitin ligase *(RIE1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 337 379
No external refs found!