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  5. Len_g15514

Len_g15514 (ERD4)


Aliases : ERD4

Description : calcium-permeable channel *(OSCA) & original description: none


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15514
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00143150 evm_27.TU.AmTr_v1... Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
AT1G11960 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
AT3G21620 No alias ERD (early-responsive to dehydration stress) family protein 0.02 OrthoFinder output from all 47 species
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.02 OrthoFinder output from all 47 species
Als_g51209 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G019000.1 HYP1, ATHYP1,... calcium-permeable channel *(OSCA) & original... 0.01 OrthoFinder output from all 47 species
Dcu_g19010 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011543001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Gb_08555 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Gb_24188 No alias calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
LOC_Os03g51620.1 RXW8, LOC_Os03g51620 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os05g51630.1 LOC_Os05g51630 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os07g05570.1 ERD4, LOC_Os07g05570 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39320.1 HYP1, ATHYP1,... calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_125601g0010 ERD4 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
MA_317011g0010 HYP1, ATHYP1 CSC1-like protein HYP1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_630721g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g05890.1 HYP1, ATHYP1 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Mp8g07950.1 ERD4 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Nbi_g13770 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012943 ERD4 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g036260.4.1 Solyc02g036260 calcium-permeable channel (OSCA) 0.08 OrthoFinder output from all 47 species
Solyc02g081030.4.1 Solyc02g081030 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Solyc08g076310.3.1 Solyc08g076310 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 6 176
IPR003864 CSC1/OSCA1-like_7TM 376 650
IPR027815 CSC1/OSCA1-like_cyt 200 363
No external refs found!