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  5. Len_g15470

Len_g15470


Description : not classified & original description: none


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15470

Target Alias Description ECC score Gene Family Method Actions
AT3G54200 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Als_g36518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17497.t1 Aspi01Gene17497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075830 No alias not classified & original description: CDS=1-888 0.02 OrthoFinder output from all 47 species
Ehy_g00605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435817g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017450 No alias not classified & original description: CDS=1213-1908 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021071 No alias not classified & original description: CDS=1-585 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021326 No alias not classified & original description: CDS=1-645 0.02 OrthoFinder output from all 47 species
Spa_g04647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 82 180
No external refs found!