Len_g15440


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15440

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g114117 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16234 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48572.t1 CRM3, HCF152,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0336.g065546 No alias not classified & original description: CDS=1-2493 0.04 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.02 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.07 OrthoFinder output from all 47 species
Ceric.23G078700.1 Ceric.23G078700 not classified & original description: pacid=50610433... 0.06 OrthoFinder output from all 47 species
Dac_g16300 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06340 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g08308 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 442 468
IPR002885 Pentatricopeptide_repeat 405 425
IPR002885 Pentatricopeptide_repeat 474 517
IPR002885 Pentatricopeptide_repeat 228 270
No external refs found!