Len_g15365


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15365
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
Adi_g001971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008420 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010621 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014913 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g033168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052145 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55316 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13687 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28687 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g32926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g39235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68455 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.03 OrthoFinder output from all 47 species
Cba_g20887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g04259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18287 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18410 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24762 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g50096 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g54960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_138676g0010 EMB2261 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
MA_89214g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26664 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03223 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09510 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33298 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57817 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo93321 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26827 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g30264 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45669 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51828 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57149 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 836 883
IPR002885 Pentatricopeptide_repeat 634 681
IPR002885 Pentatricopeptide_repeat 533 580
IPR002885 Pentatricopeptide_repeat 433 480
IPR002885 Pentatricopeptide_repeat 407 432
IPR002885 Pentatricopeptide_repeat 608 628
IPR002885 Pentatricopeptide_repeat 306 332
IPR002885 Pentatricopeptide_repeat 233 262
IPR002885 Pentatricopeptide_repeat 910 934
IPR002885 Pentatricopeptide_repeat 205 226
IPR002885 Pentatricopeptide_repeat 133 158
IPR002885 Pentatricopeptide_repeat 737 766
No external refs found!