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  5. Len_g15100

Len_g15100 (SYP21, ATSYP21,...)


Aliases : SYP21, ATSYP21, PEP12, ATPEP12, PEP12P

Description : Qa-type SYP2-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0001469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15100

Target Alias Description ECC score Gene Family Method Actions
Aop_g16776 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
GSVIVT01032954001 SYP21, ATSYP21,... Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Nbi_g04055 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Ore_g36582 VAM3, ATVAM3,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015451 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g29482 No alias Qa-type SYP2-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Spa_g00651 SYP21, ATSYP21,... Qa-type SYP2-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 211 263
IPR006011 Syntaxin_N 24 124
No external refs found!