Len_g14991 (ATCSLD4, CSLD4)

Aliases : ATCSLD4, CSLD4

Description : mannan synthase *(CSLD) & original description: none

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g14991

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	CSLD1, ATCSLD1,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00129900	ATCSLD4, CSLD4,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00057p00116280	ATCSLD5, CSLD5,...	Cellulose synthase-like protein D5 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00057p00116410	ATCSLD5, CSLD5,...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00200560	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
AMTR_s00137p00043990	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
AT2G25540	CESA10	cellulose synthase 10	0.02	OrthoFinder output from all 47 species
AT2G32620	ATCSLB02, ATCSLB2, CSLB02	cellulose synthase-like B	0.02	OrthoFinder output from all 47 species
AT4G15290	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase family protein	0.03	OrthoFinder output from all 47 species
AT5G16910	ATCSLD2, CSLD2	cellulose-synthase like D2	0.02	OrthoFinder output from all 47 species
Ala_g10683	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g48740	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Als_g52588	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Aop_g68533	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene58191.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Azfi_s0004.g008840	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: CDS=44-3832	0.03	OrthoFinder output from all 47 species
Cba_g33285	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ceric.21G060900.1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g31942	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g48668	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g18330	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006761001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01007038001	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01013057001	ATCSLD2, CSLD2	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
GSVIVT01013471001	ATH-A, CESA2, ATCESA2	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01021248001	CESA8, LEW2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01021798001	CSLD1, ATCSLD1	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	OrthoFinder output from all 47 species
GSVIVT01023643001	MUR10, ATCESA7,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
GSVIVT01028402001	CESA4, NWS2, IRX5	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
GSVIVT01030467001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
GSVIVT01033297001	IXR1, CEV1,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.04	OrthoFinder output from all 47 species
LOC_Os01g54620.1	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os04g35020.1	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.02	OrthoFinder output from all 47 species
LOC_Os07g10770.1	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g24190.1	CESA6, PRC1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os07g36610.1	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g06380.1	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25490.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os10g20090.1	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.02	OrthoFinder output from all 47 species
LOC_Os10g20260.1	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
LOC_Os10g32980.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
LOC_Os10g42750.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
MA_10435322g0010	AtCESA1, RSW1, CESA1	Probable cellulose synthase A catalytic subunit 2...	0.02	OrthoFinder output from all 47 species
MA_60546g0010	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp2g05660.1	ATCSLD3, KJK, CSLD3	catalytic component CesA of cellulose synthase complex....	0.02	OrthoFinder output from all 47 species
Mp2g07690.1	ATH-A, CESA2, ATCESA2	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Msp_g31034	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09833	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10184	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Nbi_g27743	ATCSLD2, CSLD2	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g23545	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g44822	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19942	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g16136	ATCSLD5, CSLD5, SOS6	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g24445	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Sam_g27647	No alias	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Sam_g38935	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g067520.3.1	ATCSLD4, CSLD4,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Solyc07g065660.4.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc09g075550.3.1	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Spa_g17444	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Spa_g56568	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004630_P001	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e004740_P001	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Zm00001e009843_P002	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e019828_P001	CESA8, LEW2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Zm00001e033093_P003	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e033375_P001	ATH-A, CESA2,...	catalytic component CesA of cellulose synthase complex	0.02	OrthoFinder output from all 47 species
Zm00001e034187_P001	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
MF	GO:0034061	DNA polymerase activity	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	416	712

External Links

No external refs found!

Len_g14991 (ATCSLD4, CSLD4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation