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  5. Len_g14938

Len_g14938 (PDF1)


Aliases : PDF1

Description : not classified & original description: none


Gene families : OG0001043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14938
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00030870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00158450 PDF1,... Protodermal factor 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00858p00001360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G42840 PDF1 protodermal factor 1 0.03 OrthoFinder output from all 47 species
Adi_g010045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09555 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g12595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54373.t1 Aspi01Gene54373 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71674.t1 Aspi01Gene71674 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G093300.1 Ceric.03G093300 not classified & original description: pacid=50573210... 0.02 OrthoFinder output from all 47 species
Ceric.09G029600.1 Ceric.09G029600 not classified & original description: pacid=50588127... 0.04 OrthoFinder output from all 47 species
Ceric.09G030200.1 Ceric.09G030200 not classified & original description: pacid=50586656... 0.02 OrthoFinder output from all 47 species
Ceric.22G043800.1 Ceric.22G043800 not classified & original description: pacid=50614893... 0.04 OrthoFinder output from all 47 species
Dac_g07202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g10490.1 LOC_Os01g10490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g24985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_111671g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g10620.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g22090.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g26533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010928 No alias not classified & original description: CDS=1-1425 0.03 OrthoFinder output from all 47 species
Smo437656 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g083880.2.1 Solyc06g083880 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc10g007800.3.1 PDF1, Solyc10g007800 Protodermal factor 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Spa_g51721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014410_P001 PDF1, Zm00001e014410 Protodermal factor 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e016528_P003 Zm00001e016528 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030749_P002 Zm00001e030749 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA

No InterPro domains available for this sequence

No external refs found!