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  5. Len_g14712

Len_g14712 (VAN3, SFC, AGD3)


Aliases : VAN3, SFC, AGD3

Description : class I ARF-GAP ARF-GTPase-activating protein & original description: none


Gene families : OG0002309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14712

Target Alias Description ECC score Gene Family Method Actions
AT5G61980 AGD1 ARF-GAP domain 1 0.03 OrthoFinder output from all 47 species
Aev_g02576 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Ala_g02481 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Als_g03857 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Als_g15619 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Dac_g20966 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23167 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010214001 AGD4 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
MA_10431120g0010 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Msp_g13257 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04964 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Smo232336 VAN3, SFC, AGD3 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Zm00001e003703_P003 VAN3, SFC, AGD3,... class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Zm00001e023047_P001 AGD2, Zm00001e023047 ADP-ribosylation factor GTPase-activating protein AGD2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 297 430
IPR001164 ArfGAP_dom 509 606
IPR002110 Ankyrin_rpt 749 817
No external refs found!