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  5. Len_g14534

Len_g14534 (ERF1-3)


Aliases : ERF1-3

Description : translation termination factor *(eRF1) & original description: none


Gene families : OG0002707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14534

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00031720 ERF1-3,... Protein biosynthesis.translation termination.eRF1... 0.02 OrthoFinder output from all 47 species
Ala_g17002 ERF1-2 translation termination factor *(eRF1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G010000.1 ERF1-3, Ceric.18G010000 translation termination factor *(eRF1) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g006130.3.1 ERF1-3, Solyc07g006130 eRF1 peptide release factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR005142 eRF1_3 281 418
IPR005141 eRF1_2 144 277
IPR005140 eRF1_1_Pelota 18 138
No external refs found!