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  5. Len_g14069

Len_g14069 (PAF2)


Aliases : PAF2

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0003925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14069
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.03 OrthoFinder output from all 47 species
Adi_g006511 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ala_g10461 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aop_g03101 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Aop_g04150 ARS5, PAF1, ATPSM30 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g37729 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ceric.06G076500.1 PAF2, Ceric.06G076500 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.21 ARS5, PAF1, ATPSM30 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 OrthoFinder output from all 47 species
Cre06.g304300 PAF2 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
LOC_Os02g04100.1 ARS5, PAF1,... component alpha type-6 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Lfl_g33042 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
MA_10143842g0010 PAF2 Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_713708g0010 PAF2 Proteasome subunit alpha type-1-A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g13080.1 PAF2 component alpha type-6 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Msp_g10369 ARS5, PAF1, ATPSM30 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Nbi_g00448 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Pir_g10641 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Pp3c25_15330V3.1 PAF2, Pp3c25_15330 proteasome alpha subunit F1 0.01 OrthoFinder output from all 47 species
Solyc04g080590.4.1 PAF2, Solyc04g080590 component alpha type-6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g11560 ARS5, PAF1, ATPSM30 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Spa_g24127 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 69 254
IPR000426 Proteasome_asu_N 46 68
No external refs found!