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  5. Len_g14042

Len_g14042 (HIS1-3)


Aliases : HIS1-3

Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14042

Target Alias Description ECC score Gene Family Method Actions
AT1G06760 No alias winged-helix DNA-binding transcription factor family protein 0.01 OrthoFinder output from all 47 species
Adi_g052669 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23326 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36506 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23118.t1 Aspi01Gene23118 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G011100.1 HIS1-3, Ceric.34G011100 linker histone *(H1) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G044200.1 Ceric.34G044200 linker histone *(H1) & original description:... 0.03 OrthoFinder output from all 47 species
Cre13.g567450 HIS1-3 Chromatin organisation.histones.H1 linker histone 0.02 OrthoFinder output from all 47 species
Dac_g20797 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_02738 No alias linker histone (H1) 0.01 OrthoFinder output from all 47 species
LOC_Os04g18090.1 HIS1-3, LOC_Os04g18090 linker histone (H1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08710.1 LOC_Os07g08710 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Len_g23782 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_102457g0010 No alias linker histone (H1) 0.02 OrthoFinder output from all 47 species
MA_500183g0010 HIS1-3 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Solyc09g066100.3.1 Solyc09g066100 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Solyc09g083380.4.1 Solyc09g083380 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Spa_g09322 HIS1-3 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18792 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50934 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50935 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007189_P001 HIS1-3, Zm00001e007189 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Zm00001e011857_P001 Zm00001e011857 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Zm00001e011859_P001 Zm00001e011859 linker histone (H1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 41 108
No external refs found!