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  5. Len_g13558

Len_g13558 (DEAR3)


Aliases : DEAR3

Description : subgroup ERF-II transcription factor *(ERF16/17/18) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13558

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00007p00268460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
AMTR_s00010p00099690 RAP2.6,... Ethylene-responsive transcription factor ERF110... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00195730 DREB1B, ATCBF1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00141520 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Adi_g013121 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g041740 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Adi_g057545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060280 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Adi_g082590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03105 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aev_g05911 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g20161 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g40001 No alias cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Ala_g07025 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g09848 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g10396 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g14120 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g21812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28734 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31880 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g32672 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g36635 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Als_g38509 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38628 No alias cutin and suberin biosynthesis transcription factor... 0.01 OrthoFinder output from all 47 species
Als_g57407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04116 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aob_g22889 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Aob_g26610 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Aop_g10291 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g11367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g29381 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g35542 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g38301 HRE2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g38332 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g38432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g55712 ERF-6-6, ERF6, ATERF6 subgroup ERF-IX transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene05678.t1 Aspi01Gene05678 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06525.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07735.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene08499.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene08500.t1 ATERF3, ERF3,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24401.t1 DEAR2, Aspi01Gene24401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32060.t1 Aspi01Gene32060 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41926.t1 RAP2.11, Aspi01Gene41926 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49734.t1 HRE2, Aspi01Gene49734 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63782.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene70898.t1 Aspi01Gene70898 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene70899.t1 Aspi01Gene70899 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0016.g014331 ATERF13, ERF13, EREBP not classified & original description: CDS=134-1000 0.01 OrthoFinder output from all 47 species
Cba_g08443 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Cba_g10614 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g11441 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24352 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ceric.09G047100.1 CRF3, Ceric.09G047100 subgroup ERF-VI transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.01 OrthoFinder output from all 47 species
Ceric.30G071700.1 HRE2, Ceric.30G071700 not classified & original description: pacid=50607972... 0.02 OrthoFinder output from all 47 species
Dac_g06435 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g21287 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g36841 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00708 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g05508 No alias subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14322 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dde_g02774 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10924 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g52058 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31739 No alias subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01005747001 DRN-LIKE, ESR2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01010631001 DREB1B, ATCBF1, CBF1 Dehydration-responsive element-binding protein 1D... 0.01 OrthoFinder output from all 47 species
GSVIVT01013924001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01019860001 ddf2 External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
Gb_08382 RAP2.9, DEAR5 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_15517 DEAR3 Ethylene-responsive transcription factor ERF008... 0.02 OrthoFinder output from all 47 species
Gb_19221 DEAR3 Ethylene-responsive transcription factor ERF008... 0.01 OrthoFinder output from all 47 species
Gb_24326 TINY2 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_24328 HRD transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_24329 HRD transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_26856 No alias transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_26863 tny transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_36618 DREB26 Ethylene-responsive transcription factor ERF012... 0.02 OrthoFinder output from all 47 species
Gb_36619 DEAR3 Ethylene-responsive transcription factor ERF008... 0.01 OrthoFinder output from all 47 species
LOC_Os02g43940.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43970.1 LOC_Os02g43970 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g08536 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Len_g16167 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g21808 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g29777 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.01 OrthoFinder output from all 47 species
Len_g33790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g04609 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g03917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07037 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Msp_g10836 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Msp_g12103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18832 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g21529 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g30591 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g35440 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12944 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Nbi_g14223 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17161 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g26705 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g28319 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ore_g33731 RAP2.11 transcription factor *(ERN1) & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g37778 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42309 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Pir_g37562 HRE1 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Pir_g46475 RRTF1 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04266 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015276 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc01g090300.2.1 ATERF13, ERF13,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc02g077360.1.1 Solyc02g077360 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.01 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc11g011750.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Spa_g08637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g16012 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g41579 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Spa_g51954 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Tin_g13240 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.01 OrthoFinder output from all 47 species
Zm00001e019026_P001 CRF3, Zm00001e019026 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 9 57
No external refs found!