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  5. Len_g13438

Len_g13438


Description : substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1) & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13438

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00211260 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g03275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69497 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Gb_07972 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g10850.1 LOC_Os02g10850 phenylpropanoid biosynthesis regulator (SAGL1) 0.03 OrthoFinder output from all 47 species
MA_919958g0010 SKIP6 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pnu_g04793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11708 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g29767 No alias substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo411144 No alias F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g32251 No alias substrate adaptor of SCF E3 ubiquiTin ligase complex &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 162 205
IPR006652 Kelch_1 208 255
IPR001810 F-box_dom 73 110
No external refs found!