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  5. Len_g13222

Len_g13222


Description : not classified & original description: none


Gene families : OG0001290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13222

Target Alias Description ECC score Gene Family Method Actions
AT1G56220 No alias Dormancy/auxin associated family protein 0.03 OrthoFinder output from all 47 species
Ceric.19G048000.1 Ceric.19G048000 not classified & original description: pacid=50575553... 0.03 OrthoFinder output from all 47 species
LOC_Os03g22270.1 LOC_Os03g22270 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g35190.1 LOC_Os08g35190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26620.1 LOC_Os09g26620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g44810.1 LOC_Os11g44810 Dormancy-associated protein homolog 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g19358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0137.g022505 DYL1, DRM1 not classified & original description: CDS=1-936 0.04 OrthoFinder output from all 47 species
Solyc02g077880.3.1 Solyc02g077880 Dormancy-associated protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g16017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004039_P001 Zm00001e004039 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e004332_P001 Zm00001e004332 Dormancy-associated protein 1 OS=Pisum sativum... 0.03 OrthoFinder output from all 47 species
Zm00001e038224_P001 Zm00001e038224 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR008406 DRM/ARP 7 158
No external refs found!