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  5. Len_g13053

Len_g13053 (PAT2)


Aliases : PAT2

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex & original description: none


Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g13053

Target Alias Description ECC score Gene Family Method Actions
Adi_g017424 PAT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22699 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ehy_g16404 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Lfl_g09129 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
InterPro domains Description Start Stop
IPR029390 AP3B_C 858 959
IPR002553 Clathrin/coatomer_adapt-like_N 35 421
IPR002553 Clathrin/coatomer_adapt-like_N 464 602
No external refs found!