Len_g12940

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g12940

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00031p00236610	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT5G52860	No alias	ABC-2 type transporter family protein	0.04	OrthoFinder output from all 47 species
Aev_g37051	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g23513	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Mp5g15770.1	No alias	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Msp_g13417	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e020697_P001	Zm00001e020697	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	121	273
IPR013525	ABC_2_trans	404	611

External Links

No external refs found!