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  5. Len_g12448

Len_g12448 (RABA4D, ATRABA4D)


Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase & original description: none


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12448
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.05 OrthoFinder output from all 47 species
Als_g08712 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09530 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003415001 AtRABA4a, RABA4a Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Lfl_g04534 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
MA_59492g0010 RABA4D, ATRABA4D A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Nbi_g06105 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08199 No alias A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g064020.3.1 RABA4D,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Tin_g05833 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Zm00001e038828_P001 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 13 173
No external refs found!