Len_g12265

Description : subunit beta2 of coat protein complex & original description: none

Gene families : OG0002111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g12265
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AT3G15980	No alias	Coatomer, beta' subunit	0.03	OrthoFinder output from all 47 species
Mp3g04060.1	No alias	subunit beta2 of coat protein complex	0.03	OrthoFinder output from all 47 species
Zm00001e014494_P001	Zm00001e014494	subunit beta2 of coat protein complex	0.02	OrthoFinder output from all 47 species
Zm00001e037375_P002	Zm00001e037375	subunit beta2 of coat protein complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	13	49
IPR001680	WD40_repeat	99	137
IPR001680	WD40_repeat	142	178
IPR001680	WD40_repeat	56	93
IPR006692	Coatomer_WD-assoc_reg	241	344

External Links

No external refs found!