Len_g12210 (AtERF48, DREB2C)

Aliases : AtERF48, DREB2C

Description : subgroup ERF-IV/DREB2 transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g12210

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00135920	HRE2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00069p00141520	CBF4, DREB1D,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00115p00032780	ATERF4, RAP2.5,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AT1G53170	ATERF8, ATERF-8, ERF8	ethylene response factor 8	0.02	OrthoFinder output from all 47 species
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Adi_g050305	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g074528	ERF-1, ATERF-1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g100845	ATERF3, ERF3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g02279	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g05911	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aev_g08226	ERF38, ATERF38	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g11814	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Als_g48036	DEAR2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10500	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21624	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aspi01Gene23161.t1	Aspi01Gene23161	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34481.t1	Aspi01Gene34481	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43376.t1	DREB26, Aspi01Gene43376	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene43377.t1	DREB26, Aspi01Gene43377	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene47288.t1	Aspi01Gene47288	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene53915.t1	Aspi01Gene53915	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene56617.t1	DEAR2, Aspi01Gene56617	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56618.t1	DEAR2, Aspi01Gene56618	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56619.t1	RAP2.1, Aspi01Gene56619	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0007.g011182	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g23008	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g23248	RAP2.4	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g00325	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g21774	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Gb_34285	HRD	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Lfl_g15284	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_100577g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_100724g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10082062g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_10370681g0010	ORA47	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_1037g0020	ORA47	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_10436654g0010	ORA47	Ethylene-responsive transcription factor ERF018...	0.02	OrthoFinder output from all 47 species
MA_12171g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_164803g0010	tny	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_184464g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_2128446g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_230706g0010	No alias	Ethylene-responsive transcription factor ERF017...	0.02	OrthoFinder output from all 47 species
MA_27309g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_5530g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
MA_6305g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_66442g0010	No alias	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_7166g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_7168929g0010	No alias	Ethylene-responsive transcription factor ERF016...	0.02	OrthoFinder output from all 47 species
MA_83118g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_914123g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_9160409g0010	No alias	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
MA_959784g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
MA_9785986g0010	No alias	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Pir_g49983	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g39824	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e007352_P001	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e014413_P001	Zm00001e014413	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e015219_P001	Zm00001e015219	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e023870_P001	RAP2.4, Zm00001e023870	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e025840_P001	DREB2A, DREB2,...	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e030279_P001	ATERF3, ERF3,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e041781_P001	DEAR2, Zm00001e041781	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	188	237

External Links

No external refs found!

Len_g12210 (AtERF48, DREB2C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation