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  5. Len_g12199

Len_g12199


Description : regulatory protein *(RCF3) of HYL1-phosphorylation & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12199
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Adi_g084661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031037001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10345 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ppi_g12960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g077060.3.1 Solyc04g077060 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 335 384
IPR004088 KH_dom_type_1 59 110
IPR004088 KH_dom_type_1 564 628
IPR004088 KH_dom_type_1 419 481
IPR004088 KH_dom_type_1 177 244
No external refs found!