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  5. Len_g12188

Len_g12188 (ATCPL1, CPL1, FRY2)


Aliases : ATCPL1, CPL1, FRY2

Description : subcluster CPL phosphatase & original description: none


Gene families : OG0002263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00267690 ATCPL1, CPL1,... Protein modification.dephosphorylation.aspartate-based... 0.03 OrthoFinder output from all 47 species
AT5G01270 CPL2, ATCPL2 carboxyl-terminal domain (ctd) phosphatase-like 2 0.02 OrthoFinder output from all 47 species
Ala_g07037 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14450 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G049400.1 ATCPL1, CPL1,... subcluster CPL phosphatase & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g07780 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14579 ATCPL1, CPL1, FRY2 RNA polymerase-II phosphatase. CPL phosphatase 0.02 OrthoFinder output from all 47 species
Lfl_g03473 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03481 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07706 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g30260 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12247 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29272 No alias subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g078550.3.1 ATCPL1, CPL1,... RNA polymerase-II phosphatase. CPL phosphatase 0.05 OrthoFinder output from all 47 species
Spa_g54226 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06700 ATCPL1, CPL1, FRY2 subcluster CPL phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015225_P001 ATCPL1, CPL1,... RNA polymerase-II phosphatase. CPL phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 257 370
IPR014720 dsRBD_dom 859 923
IPR014720 dsRBD_dom 721 782
No external refs found!