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  5. Len_g12143

Len_g12143


Description : component *(CAP-G2) of condensin II complex & original description: none


Gene families : OG0009637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009637_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12143
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00164p00024520 evm_27.TU.AmTr_v1... Cell cycle.mitosis and meiosis.chromatin... 0.1 OrthoFinder output from all 47 species
Aop_g04605 No alias component *(CAP-G2) of condensin II complex & original... 0.16 OrthoFinder output from all 47 species
Aspi01Gene35358.t1 Aspi01Gene35358 component *(CAP-G2) of condensin II complex & original... 0.09 OrthoFinder output from all 47 species
Azfi_s0156.g053699 No alias component *(CAP-G2) of condensin II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.25G025200.1 Ceric.25G025200 component *(CAP-G2) of condensin II complex & original... 0.21 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.68 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01000124001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder output from all 47 species
Gb_28704 No alias component CAP-G2 of condensin II complex 0.13 OrthoFinder output from all 47 species
LOC_Os03g42040.1 LOC_Os03g42040 component CAP-G2 of condensin II complex 0.09 OrthoFinder output from all 47 species
MA_10336842g0010 No alias component CAP-G2 of condensin II complex 0.05 OrthoFinder output from all 47 species
MA_10435289g0010 No alias component CAP-G2 of condensin II complex 0.09 OrthoFinder output from all 47 species
Mp6g20310.1 No alias component CAP-G2 of condensin II complex 0.15 OrthoFinder output from all 47 species
Nbi_g06321 No alias component *(CAP-G2) of condensin II complex & original... 0.22 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011407 No alias component *(CAP-G2) of condensin II complex & original... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR024741 Condensin2_G2 233 380
No external refs found!