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  5. Len_g11463

Len_g11463


Description : not classified & original description: none


Gene families : OG0005770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005770_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11463

Target Alias Description ECC score Gene Family Method Actions
Adi_g008160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11406 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11696.t1 Aspi01Gene11696 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G065800.1 Ceric.37G065800 not classified & original description: pacid=50615955... 0.03 OrthoFinder output from all 47 species
Dac_g20541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_25386 No alias Spliceosome-associated protein 130 A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_129261g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 972 1320
IPR018846 Cleavage/polyA-sp_fac_asu_N 100 670
No external refs found!