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  5. Len_g11444

Len_g11444 (PA200)


Aliases : PA200

Description : proteasome core particle assembly factor *(PA200) & original description: none


Gene families : OG0001792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001792_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11444

Target Alias Description ECC score Gene Family Method Actions
Als_g01986 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62923.t1 PA200, Aspi01Gene62923 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0197.g057334 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Ceric.17G047600.1 PA200, Ceric.17G047600 proteasome core particle assembly factor *(PA200) &... 0.07 OrthoFinder output from all 47 species
Ceric.28G034600.1 PA200, Ceric.28G034600 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Cre14.g628702 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04235 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28180 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28181 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28182 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g35781 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
MA_10429645g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433922g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_51487g0010 PA200 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g05013 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Nbi_g26780 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Ore_g17276 PA200 proteasome core particle assembly factor *(PA200) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011208 PA200 proteasome core particle assembly factor *(PA200) &... 0.04 OrthoFinder output from all 47 species
Solyc07g066030.4.1 PA200, Solyc07g066030 Proteasome activator subunit 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR021843 PSME4_C 1793 1879
IPR032430 Blm10_mid 533 843
IPR032430 Blm10_mid 315 521
No external refs found!