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  5. Len_g11299

Len_g11299


Description : not classified & original description: none


Gene families : OG0005387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g11299

Target Alias Description ECC score Gene Family Method Actions
Aob_g07222 CTF2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36504.t1 Aspi01Gene36504 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G037200.1 Ceric.31G037200 not classified & original description: pacid=50575016... 0.03 OrthoFinder output from all 47 species
Lfl_g01121 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267304g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10429390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00547 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14026 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008063 CTF2A not classified & original description: CDS=115-807 0.04 OrthoFinder output from all 47 species
Smo447003 No alias Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Tin_g02582 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 171 392
No external refs found!