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  5. Len_g10910

Len_g10910 (RHM1, ROL1, ATRHM1)


Aliases : RHM1, ROL1, ATRHM1

Description : UDP-L-rhamnose synthase *(RHM) & original description: none


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10910

Target Alias Description ECC score Gene Family Method Actions
AT1G53500 ATRHM2, RHM2,... NAD-dependent epimerase/dehydratase family protein 0.04 OrthoFinder output from all 47 species
Aev_g13357 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01244 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18717 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14366 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G004900.1 ATRHM2, RHM2,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.05 OrthoFinder output from all 47 species
Gb_18288 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species
Mp1g04880.1 NRS/ER, UER1 UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species
Msp_g10007 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001861 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: CDS=1-2019 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005330 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g01511 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015435_P001 NRS/ER, UER1,... UDP-L-rhamnose synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 13 318
No external refs found!