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  5. Len_g10406

Len_g10406


Description : solute transporter *(NAT) & original description: none


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g10406
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00102240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s00151p00089770 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Als_g05633 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02126 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28191 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12772 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014299 No alias solute transporter *(NAT) & original description: CDS=328-1908 0.04 OrthoFinder output from all 47 species
Ceric.09G071100.1 Ceric.09G071100 solute transporter *(NAT) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g22944 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40643 No alias solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Lfl_g18801 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28268 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g05640.1 No alias solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Msp_g13499 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30058 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09203 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07136 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03023 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003401 No alias solute transporter *(NAT) & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Sam_g06480 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Smo185282 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Smo73581 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc06g071330.4.1 Solyc06g071330 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Spa_g04707 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04574 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004232_P002 Zm00001e004232 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 30 434
No external refs found!