Len_g09904


Description : component *(PnsB5/NDH18) of NDH subcomplex B & original description: none


Gene families : OG0008300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008300_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267790 NDH18,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.03 OrthoFinder output from all 47 species
AT5G43750 NDH18 NAD(P)H dehydrogenase 18 0.07 OrthoFinder output from all 47 species
Aev_g02431 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Ala_g17202 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Als_g07854 NDH18 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Aob_g02633 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Aop_g04082 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0050.g030970 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Cba_g27058 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G064300.1 Ceric.14G064300 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Dac_g03604 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10625 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.05 OrthoFinder output from all 47 species
Dde_g03709 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00304 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01018092001 NDH18 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.05 OrthoFinder output from all 47 species
Gb_22200 No alias component PnsB5/NDH18 of NDH subcomplex B 0.05 OrthoFinder output from all 47 species
LOC_Os01g70400.1 NDH18, LOC_Os01g70400 component PnsB5/NDH18 of NDH subcomplex B 0.05 OrthoFinder output from all 47 species
Lfl_g12179 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.08 OrthoFinder output from all 47 species
Msp_g10241 NDH18 component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Nbi_g08544 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Ore_g00563 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Pir_g10007 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Pnu_g22101 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01810 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025789 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g25114 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.04 OrthoFinder output from all 47 species
Solyc09g083190.3.1 NDH18, Solyc09g083190 component PnsB5/NDH18 of NDH subcomplex B 0.04 OrthoFinder output from all 47 species
Spa_g11055 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.07 OrthoFinder output from all 47 species
Tin_g37061 No alias component *(PnsB5/NDH18) of NDH subcomplex B & original... 0.1 OrthoFinder output from all 47 species
Zm00001e018750_P001 NDH18, Zm00001e018750 component PnsB5/NDH18 of NDH subcomplex B 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!