Aliases : PDS3, PDS, PDE226
Description : phytoene desaturase *(PDS) & original description: none
Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Len_g09650 | |
Cluster | HCCA: Cluster_148 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G14210 | PDS3, PDS, PDE226 | phytoene desaturase 3 | 0.06 | OrthoFinder output from all 47 species | |
Aop_g01360 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g36080 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ceric.08G066500.1 | PDS3, PDS,... | phytoene desaturase *(PDS) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g509650 | PDS3, PDS, PDE226 | Secondary metabolism.terpenoids.terpenoid... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g11776 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g01529 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g08570.1 | PDS3, PDS,... | phytoene desaturase (PDS) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07047 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0048.g013549 | PDS3, PDS, PDE226 | phytoene desaturase *(PDS) & original description: CDS=202-1980 | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002937 | Amino_oxidase | 109 | 550 |
No external refs found! |