1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g09650

Len_g09650 (PDS3, PDS, PDE226)


Aliases : PDS3, PDS, PDE226

Description : phytoene desaturase *(PDS) & original description: none


Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09650
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT4G14210 PDS3, PDS, PDE226 phytoene desaturase 3 0.06 OrthoFinder output from all 47 species
Aop_g01360 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36080 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.08G066500.1 PDS3, PDS,... phytoene desaturase *(PDS) & original description:... 0.04 OrthoFinder output from all 47 species
Cre12.g509650 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Dac_g11776 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g01529 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g08570.1 PDS3, PDS,... phytoene desaturase (PDS) 0.02 OrthoFinder output from all 47 species
Nbi_g07047 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013549 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: CDS=202-1980 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 109 550
No external refs found!