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  5. Len_g09208

Len_g09208 (PRORP1)


Aliases : PRORP1

Description : protein-only ribonuclease *(RNase P) & original description: none


Gene families : OG0002292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002292_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g09208
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT2G32230 PRORP1 proteinaceous RNase P 1 0.04 OrthoFinder output from all 47 species
Azfi_s0102.g044548 PRORP1 protein-only ribonuclease *(RNase P) & original... 0.04 OrthoFinder output from all 47 species
Ceric.37G064300.1 PRORP3, Ceric.37G064300 protein-only ribonuclease *(RNase P) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g23240 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015365001 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.05 OrthoFinder output from all 47 species
LOC_Os02g17360.1 PRORP1, LOC_Os02g17360 protein-only ribonuclease (RNase P) 0.05 OrthoFinder output from all 47 species
Mp4g06160.1 PRORP1 protein-only ribonuclease (RNase P) 0.02 OrthoFinder output from all 47 species
Ore_g35195 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26462 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Smo80247 PRORP1 RNA processing.ribonuclease activities.RNase P... 0.03 OrthoFinder output from all 47 species
Solyc07g019650.4.1 PRORP1, Solyc07g019650 protein-only ribonuclease (RNase P) 0.02 OrthoFinder output from all 47 species
Spa_g25822 PRORP1 protein-only ribonuclease *(RNase P) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018528_P001 PRORP2, Zm00001e018528 protein-only ribonuclease (RNase P) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009435 NAD biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019674 NAD metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033443 PPR_long 213 278
IPR033443 PPR_long 320 463
IPR031595 PRORP_C 508 738
No external refs found!