- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LRX2
Description : LRR-domain extensin & original description: none
Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g08774 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g26231 | LRX2 | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03749 | No alias | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g18015 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11490 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04597 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G055900.1 | Ceric.17G055900 | LRR-domain extensin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15319 | No alias | LRR-domain extensin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g11931 | No alias | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g25460.1 | LOC_Os01g25460 | LRR-domain extensin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g08770.2 | LOC_Os05g08770 | LRR-domain extensin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g35710.1 | LOC_Os12g35710 | LRR-domain extensin | 0.02 | OrthoFinder output from all 47 species | |
| Len_g38364 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19666 | No alias | LRR-domain extensin & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Nbi_g23899 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g10314 | No alias | LRR-domain extensin & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g31622 | No alias | LRR-domain extensin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g053840.1.1 | Solyc07g053840 | LRR-domain extensin | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g02389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05733 | LRX2 | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06077 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06078 | No alias | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g51371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46219 | LRX2 | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013210 | LRR_N_plant-typ | 73 | 105 |
| No external refs found! |