Aliases : emb1507
Description : RNA helicase *(Brr2) & original description: none
Gene families : OG0001175 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00114710 | emb1507,... | RNA processing.RNA splicing.spliceosome... | 0.04 | OrthoFinder output from all 47 species | |
AT5G61140 | No alias | U5 small nuclear ribonucleoprotein helicase | 0.03 | OrthoFinder output from all 47 species | |
Adi_g117139 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g29910 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g04355 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01991 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aspi01Gene33378.t1 | Aspi01Gene33378 | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cre17.g744147 | emb1507 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g19260 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g12876 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007875001 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01010769001 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.08 | OrthoFinder output from all 47 species | |
Gb_18049 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.05 | OrthoFinder output from all 47 species | |
Gb_27895 | emb1507 | RNA helicase (Brr2) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os02g01740.1 | emb1507, LOC_Os02g01740 | RNA helicase (Brr2) | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g05048 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10429486g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.04 | OrthoFinder output from all 47 species | |
MA_10434882g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.02 | OrthoFinder output from all 47 species | |
MA_81219g0020 | emb1507 | DExH-box ATP-dependent RNA helicase DExH12... | 0.02 | OrthoFinder output from all 47 species | |
MA_823844g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH14... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g06890.1 | emb1507 | RNA helicase (Brr2) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g16836 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g09250 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g36113 | No alias | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo144158 | emb1507 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g082100.4.1 | emb1507, Solyc06g082100 | RNA helicase (Brr2) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g52342 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07743 | emb1507 | RNA helicase *(Brr2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e035676_P001 | emb1507, Zm00001e035676 | RNA helicase (Brr2) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038727_P001 | Zm00001e038727 | DExH-box ATP-dependent RNA helicase DExH14... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No external refs found! |