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  5. Len_g08558

Len_g08558


Description : manganese/calcium cation transporter *(BICAT) & original description: none


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g08558

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00041910 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
Ala_g09890 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.42 No alias GDT1-like protein 5 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dcu_g02609 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01019117001 No alias GDT1-like protein 4 OS=Oryza sativa subsp. indica 0.04 OrthoFinder output from all 47 species
Gb_39101 No alias manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Nbi_g04674 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 94 167
IPR001727 Gdt1 218 291
No external refs found!