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  5. Len_g07704

Len_g07704


Description : not classified & original description: none


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07704

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g029853 No alias not classified & original description: CDS=504-1643 0.02 OrthoFinder output from all 47 species
Ceric.12G032500.1 Ceric.12G032500 VPS23-interacting protein *(SH3P2) & original... 0.04 OrthoFinder output from all 47 species
Gb_05416 No alias SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g36870.1 LOC_Os10g36870 VPS23-interacting protein (SH3P2) 0.03 OrthoFinder output from all 47 species
MA_10428425g0010 No alias SH3 domain-containing protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10115 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03908 No alias VPS23-interacTing protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 365 413
No external refs found!