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  5. Len_g07210

Len_g07210


Description : not classified & original description: none


Gene families : OG0001514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g07210

Target Alias Description ECC score Gene Family Method Actions
AT3G58520 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.03 OrthoFinder output from all 47 species
Adi_g056854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g00927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G018700.1 Ceric.24G018700 not classified & original description: pacid=50629155... 0.03 OrthoFinder output from all 47 species
Dac_g12385 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_04492 No alias WTF9 mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Msp_g05381 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31693 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014695_P001 Zm00001e014695 no description available(sp|q9zuz6|wtf9_arath : 128.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 85 419
No external refs found!