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  5. Len_g06526

Len_g06526


Description : not classified & original description: none


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g06526
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cba_g18937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G005100.1 Ceric.37G005100 not classified & original description: pacid=50616791... 0.04 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.04 OrthoFinder output from all 47 species
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_105516g0020 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Pnu_g01539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019776 No alias not classified & original description: CDS=123-641 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022956 No alias not classified & original description: CDS=1-318 0.03 OrthoFinder output from all 47 species
Sam_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 13 142
No external refs found!