Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00011p00198170 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT2G21580 | No alias | Ribosomal protein S25 family protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G34555 | No alias | Ribosomal protein S25 family protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G39200 | No alias | Ribosomal protein S25 family protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g042160 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g37907 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre08.g382500 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g35742 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023806001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g44480.1 | LOC_Os08g44480 | component RPS25 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os09g39540.1 | LOC_Os09g39540 | component RPS25 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os11g05562.1 | LOC_Os11g05562 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
MA_10430279g0010 | No alias | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp4g06120.1 | No alias | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Msp_g10038 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g00738 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c14_13580V3.1 | Pp3c14_13580 | Ribosomal protein S25 family protein | 0.02 | OrthoFinder output from all 47 species | |
Pp3c17_4670V3.1 | Pp3c17_4670 | Ribosomal protein S25 family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c1_25330V3.1 | Pp3c1_25330 | Ribosomal protein S25 family protein | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g59081 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g069850.3.1 | Solyc02g069850 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Spa_g03086 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g03786 | No alias | component *(eS25) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003921_P001 | Zm00001e003921 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019589_P001 | Zm00001e019589 | component RPS25 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e022058_P001 | Zm00001e022058 | component RPS25 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
MF | GO:0004659 | prenyltransferase activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008318 | protein prenyltransferase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
CC | GO:0016272 | prefoldin complex | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0018342 | protein prenylation | IEP | HCCA |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097354 | prenylation | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004977 | Ribosomal_S25 | 9 | 106 |
No external refs found! |