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  5. Len_g05459

Len_g05459 (AGO1)


Aliases : AGO1

Description : regulatory protein *(AGO7) of transacting siRNA pathway & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g05459

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00114260 AGO2,... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g10666 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.28G056900.1 AGO1, Ceric.28G056900 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ehy_g05037 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
MA_118377g0010 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Tin_g18796 AGO1 miRNA recruiTing factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR032472 ArgoL2 387 433
IPR003100 PAZ_dom 271 376
IPR032474 Argonaute_N 57 188
IPR003165 Piwi 547 846
IPR014811 ArgoL1 199 246
No external refs found!