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  5. Len_g04986

Len_g04986 (SEP1)


Aliases : SEP1

Description : light-responsive regulatory protein *(SEP1) & original description: none


Gene families : OG0007715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007715_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04986
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT4G34190 SEP1 stress enhanced protein 1 0.05 OrthoFinder output from all 47 species
Als_g02175 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g00643 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g11480 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0179.g056293 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.10G038300.1 SEP1, Ceric.10G038300 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Dac_g05406 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g21079 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Gb_32155 SEP1 SEP1 LHC-related protein 0.03 OrthoFinder output from all 47 species
Mp3g06770.1 NPQ4, PSBS SEP1 LHC-related protein 0.03 OrthoFinder output from all 47 species
Nbi_g24121 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g60841 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g01617 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.07 OrthoFinder output from all 47 species
Solyc01g107660.3.1 SEP1, Solyc01g107660 SEP1 LHC-related protein 0.05 OrthoFinder output from all 47 species
Spa_g00094 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.07 OrthoFinder output from all 47 species
Tin_g03659 No alias light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!