Len_g04817

Description : component *(FtsHi) of protein translocation ATPase motor complex & original description: none

Gene families : OG0007997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007997_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g04817
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00072250	evm_27.TU.AmTr_v1...	Probable inactive ATP-dependent zinc metalloprotease...	0.02	OrthoFinder output from all 47 species
AT5G64580	No alias	AAA-type ATPase family protein	0.02	OrthoFinder output from all 47 species
Ala_g02523	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.04	OrthoFinder output from all 47 species
GSVIVT01026499001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder output from all 47 species
Mp8g05580.1	No alias	component FtsHi of protein translocation ATPase motor complex	0.02	OrthoFinder output from all 47 species
Nbi_g10216	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018799	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Sam_g17236	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g063360.3.1	Solyc04g063360	component FtsHi of protein translocation ATPase motor complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004784	superoxide dismutase activity	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006801	superoxide metabolic process	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	328	500
IPR041569	AAA_lid_3	266	306
IPR003959	ATPase_AAA_core	102	236

External Links

No external refs found!