Len_g04288 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04288

Target Alias Description ECC score Gene Family Method Actions
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16765 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30841.t1 OTP82, Aspi01Gene30841 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.02 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Dac_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023818001 CRR28 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
MA_10435641g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011528 EMB2758 non-specific cation channel *(PQL1) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015239 No alias not classified & original description: CDS=1-2529 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020039 No alias not classified & original description: CDS=1-2721 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025550 No alias not classified & original description: CDS=1-2784 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0321.g027231 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.03 OrthoFinder output from all 47 species
Smo118770 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.04 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 360 407
IPR002885 Pentatricopeptide_repeat 257 304
IPR002885 Pentatricopeptide_repeat 156 202
IPR002885 Pentatricopeptide_repeat 54 100
IPR002885 Pentatricopeptide_repeat 434 460
No external refs found!