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  5. Len_g03399

Len_g03399


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g03399

Target Alias Description ECC score Gene Family Method Actions
Ala_g32541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017438 No alias not classified & original description: CDS=1-1629 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 100 146
IPR002885 Pentatricopeptide_repeat 435 481
IPR002885 Pentatricopeptide_repeat 787 833
IPR002885 Pentatricopeptide_repeat 200 248
IPR002885 Pentatricopeptide_repeat 668 716
IPR002885 Pentatricopeptide_repeat 963 987
IPR002885 Pentatricopeptide_repeat 320 350
IPR002885 Pentatricopeptide_repeat 407 433
IPR002885 Pentatricopeptide_repeat 555 583
No external refs found!