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  5. Len_g02782

Len_g02782


Description : not classified & original description: none


Gene families : OG0001946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02782
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Aev_g25751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G039400.1 Ceric.07G039400 not classified & original description: pacid=50626115... 0.05 OrthoFinder output from all 47 species
Ceric.32G005500.1 Ceric.32G005500 not classified & original description: pacid=50598076... 0.04 OrthoFinder output from all 47 species
LOC_Os05g25180.1 LOC_Os05g25180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018883 No alias not classified & original description: CDS=196-1485 0.03 OrthoFinder output from all 47 species
Solyc06g048520.3.1 Solyc06g048520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!