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  5. Len_g02558

Len_g02558 (J8)


Aliases : J8

Description : component Toc12 of outer envelope TOC translocation system & original description: none


Gene families : OG0000897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02558

Target Alias Description ECC score Gene Family Method Actions
Lfl_g29043 J8 component Toc12 of outer envelope TOC translocation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006694 J8 component Toc12 of outer envelope TOC translocation... 0.02 OrthoFinder output from all 47 species
Solyc03g117590.3.1 J8, Solyc03g117590 component Toc12 of outer envelope TOC translocation system 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 53 103
No external refs found!