Len_g02540


Description : not classified & original description: none


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02540

Target Alias Description ECC score Gene Family Method Actions
AT4G20220 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.06 OrthoFinder output from all 47 species
Adi_g038258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28278 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g28344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g46292 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g48364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15080 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31601 CRK8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g50255 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01089.t1 Aspi01Gene01089 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05932.t1 Aspi01Gene05932 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08072.t1 Aspi01Gene08072 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11269.t1 Aspi01Gene11269 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13126.t1 Aspi01Gene13126 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16261.t1 Aspi01Gene16261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19256.t1 ORF240B, Aspi01Gene19256 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32248.t1 Aspi01Gene32248 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34179.t1 Aspi01Gene34179 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34520.t1 Aspi01Gene34520 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47312.t1 Aspi01Gene47312 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50985.t1 Aspi01Gene50985 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61018.t1 CRK8, Aspi01Gene61018 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68127.t1 Aspi01Gene68127 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26941 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g30690 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g57306 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G098000.1 Ceric.03G098000 not classified & original description: pacid=50571557... 0.04 OrthoFinder output from all 47 species
Ceric.04G084800.1 Ceric.04G084800 not classified & original description: pacid=50632004... 0.06 OrthoFinder output from all 47 species
Ceric.18G038800.1 Ceric.18G038800 not classified & original description: pacid=50621513... 0.05 OrthoFinder output from all 47 species
Dac_g28552 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g33305 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g14399 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g39047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28911 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g06379 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39093 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41564 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g27458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39166 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c13_150V3.1 Pp3c13_150 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c1_21700V3.1 Pp3c1_21700 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c3_32070V3.1 Pp3c3_32070 No annotation 0.01 OrthoFinder output from all 47 species
Pp3s38_160V3.1 CRK8, Pp3s38_160 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Ppi_g26629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27078 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!