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  5. Len_g02365

Len_g02365 (NPR1, SAI1, ATNPR1, NIM1)


Aliases : NPR1, SAI1, ATNPR1, NIM1

Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02365

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 50 101
IPR021094 NPR1/NIM1-like_C 382 567
IPR002110 Ankyrin_rpt 320 372
No external refs found!